STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI05108.1Type II secretion system protein B. (207 aa)    
Predicted Functional Partners:
SHH39338.1
FecR family protein.
  
 
 0.899
SHH93379.1
Iron complex outermembrane recepter protein.
    
 
 0.855
SHI05100.1
Type II secretory pathway, component ExeA (predicted ATPase).
  
    0.807
SHI00687.1
Competence/damage-inducible protein cinA; Belongs to the CinA family.
     
 0.702
SHH45415.1
Peptidylprolyl isomerase.
    
 0.646
SHH75849.1
Subtilase family protein.
  
 
 0.642
SHH56776.1
Flagellar motor switch protein FliN/FliY.
   
 
 0.615
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
   
 0.541
SHI05088.1
Type II secretion system protein N.
       0.521
fliE
Flagellar hook-basal body complex protein FliE.
   
   0.518
Your Current Organism:
Desulfofustis glycolicus
NCBI taxonomy Id: 1121409
Other names: D. glycolicus DSM 9705, Desulfofustis glycolicus DSM 9705
Server load: low (22%) [HD]