STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000686525_00919Unannotated protein. (307 aa)    
Predicted Functional Partners:
GCA_000686525_00631
Unannotated protein.
    
 0.755
GCA_000686525_00630
Unannotated protein.
  
 
 0.752
GCA_000686525_00678
Unannotated protein.
     
 0.731
GCA_000686525_00680
Unannotated protein.
     
 0.731
GCA_000686525_00679
Unannotated protein.
     
 0.720
GCA_000686525_00676
Unannotated protein.
   
 
  0.708
GCA_000686525_00677
Unannotated protein.
   
 
  0.708
GCA_000686525_00674
Unannotated protein.
     
 0.705
GCA_000686525_00675
Unannotated protein.
     
 0.705
GCA_000686525_01414
Unannotated protein.
   
    0.649
Your Current Organism:
Desulfonatronovibrio hydrogenovorans
NCBI taxonomy Id: 1121413
Other names: D. hydrogenovorans DSM 9292, Desulfonatronovibrio hydrogenovorans DSM 9292
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.