STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000686525_01317Unannotated protein. (345 aa)    
Predicted Functional Partners:
GCA_000686525_00304
Unannotated protein.
 
 
 0.934
GCA_000686525_01318
Unannotated protein.
       0.805
GCA_000686525_00836
Unannotated protein.
   
  
 0.784
GCA_000686525_02307
Unannotated protein.
 
 
 0.754
GCA_000686525_01316
Unannotated protein.
       0.717
GCA_000686525_02720
Unannotated protein.
  
   0.681
GCA_000686525_01315
Unannotated protein.
  
  
 0.670
GCA_000686525_02747
Unannotated protein.
  
 
  0.603
GCA_000686525_02591
Unannotated protein.
   
 
 0.583
GCA_000686525_02638
Unannotated protein.
  
    0.576
Your Current Organism:
Desulfonatronovibrio hydrogenovorans
NCBI taxonomy Id: 1121413
Other names: D. hydrogenovorans DSM 9292, Desulfonatronovibrio hydrogenovorans DSM 9292
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.