STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO42588.1Uncharacterised ACR, YkgG family COG1556. (217 aa)    
Predicted Functional Partners:
SHO44394.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.900
SHO49536.1
Nitrate reductase gamma subunit.
  
 0.894
SHO46588.1
L-lactate dehydrogenase complex protein LldG.
  
 
 0.803
SHO49071.1
L-lactate dehydrogenase complex protein LldG.
  
 
 0.803
SHO45382.1
Phosphoglycolate phosphatase.
 
      0.795
SHO42587.1
Putative protease.
       0.778
SHO48660.1
4Fe-4S binding domain-containing protein.
  
 0.765
SHO42675.1
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 
 0.758
SHO52717.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 
 0.758
SHO48866.1
NADPH-dependent glutamate synthase beta chain.
  
 
 0.749
Your Current Organism:
Desulfopila aestuarii
NCBI taxonomy Id: 1121416
Other names: D. aestuarii DSM 18488, Desulfopila aestuarii DSM 18488
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