STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO44520.1Hypothetical protein. (282 aa)    
Predicted Functional Partners:
SHO50619.1
Hypothetical protein.
  
     0.740
SHO42938.1
Hypothetical protein.
  
     0.654
SHO47269.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
  
     0.646
SHO49059.1
Hypothetical protein.
  
     0.639
SHO49728.1
Hypothetical protein.
  
     0.624
SHO43039.1
Hypothetical protein.
  
     0.614
SHO43009.1
Putative exonuclease, RdgC.
  
     0.593
SHO45028.1
Putative adenylylsulfate reductase-associated electron transfer protein QmoC.
  
     0.567
SHO49943.1
Hypothetical protein.
  
     0.564
SHO45456.1
Hypothetical protein.
  
     0.559
Your Current Organism:
Desulfopila aestuarii
NCBI taxonomy Id: 1121416
Other names: D. aestuarii DSM 18488, Desulfopila aestuarii DSM 18488
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.