STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO46218.1Dissimilatory sulfite reductase beta subunit. (375 aa)    
Predicted Functional Partners:
SHO46219.1
Dissimilatory sulfite reductase alpha subunit.
 
0.999
SHO46217.1
Dissimilatory sulfite reductase D (DsrD).
 
 
 
 0.997
SHO47464.1
tRNA 2-thiouridine synthesizing protein E.
 
 
 
 0.997
SHO45036.1
Dissimilatory adenylylsulfate reductase alpha subunit precursor.
 
 
 0.990
SHO45039.1
Dissimilatory adenylylsulfate reductase beta subunit.
  
 
 0.990
SHO48330.1
tRNA 2-thiouridine synthesizing protein E.
 
 
 
 0.983
SHO49706.1
Putative sulfite reductase-associated electron transfer protein DsrM.
 
   
 0.957
SHO49703.1
Putative sulfite reductase-associated electron transfer protein DsrO.
 
 
 0.920
SHO44394.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.878
SHO45673.1
Sulfate adenylyltransferase.
  
   
 0.845
Your Current Organism:
Desulfopila aestuarii
NCBI taxonomy Id: 1121416
Other names: D. aestuarii DSM 18488, Desulfopila aestuarii DSM 18488
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