STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO46433.1Hydrogenase small subunit. (311 aa)    
Predicted Functional Partners:
SHO46435.1
Hydrogenase large subunit.
 0.999
SHO48220.1
Hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 0.999
SHO48218.1
Ni/Fe-hydrogenase 1 B-type cytochrome subunit.
 
 
 0.997
SHO44394.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
 
 0.946
SHO46267.1
Protein of unknown function.
   
 
 0.944
SHO48210.1
Hydrogenase maturation protease.
 
  
 0.880
SHO48205.1
Hydrogenase nickel incorporation protein HypB.
 
  
 0.863
SHO48221.1
Hydrogenase small subunit.
 
  
 
0.860
SHO48489.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
   
 
 0.821
SHO48212.1
Hydrogenase maturation protein, carbamoyl dehydratase HypE.
 
   
 0.791
Your Current Organism:
Desulfopila aestuarii
NCBI taxonomy Id: 1121416
Other names: D. aestuarii DSM 18488, Desulfopila aestuarii DSM 18488
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.