STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO47819.13-methylcrotonyl-CoA carboxylase alpha subunit. (671 aa)    
Predicted Functional Partners:
SHO42864.1
Pyruvate carboxylase subunit B.
 
0.999
SHO50970.1
Pyruvate carboxylase subunit B.
0.999
SHO47823.1
3-methylcrotonyl-CoA carboxylase beta subunit.
 0.998
SHO47269.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
 0.995
SHO50964.1
propionyl-CoA carboxylase beta chain.
 
 0.995
SHO50979.1
propionyl-CoA carboxylase beta chain.
 
 0.995
SHO51195.1
methylmalonyl-CoA decarboxylase alpha subunit.
 
 0.995
SHO48553.1
Pyruvate carboxylase.
 
 0.989
SHO47817.1
hydroxymethylglutaryl-CoA lyase.
 
 0.963
SHO46216.1
BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase.
  
 0.952
Your Current Organism:
Desulfopila aestuarii
NCBI taxonomy Id: 1121416
Other names: D. aestuarii DSM 18488, Desulfopila aestuarii DSM 18488
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.