STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO48152.1Acyl-CoA dehydrogenase. (397 aa)    
Predicted Functional Partners:
SHO48149.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
 0.994
SHO51843.1
LPS sulfotransferase NodH.
  
 0.963
SHO44109.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.945
SHO47598.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.945
SHO48151.1
Transcriptional regulator, TetR family.
 
   
 0.898
SHO48154.1
Electron transfer flavoprotein alpha subunit apoprotein.
 0.890
SHO44394.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.859
SHO48147.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
 0.833
SHO44092.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
 0.812
SHO48156.1
Electron transfer flavoprotein beta subunit.
  
 
 0.806
Your Current Organism:
Desulfopila aestuarii
NCBI taxonomy Id: 1121416
Other names: D. aestuarii DSM 18488, Desulfopila aestuarii DSM 18488
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.