STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO48424.1Nucleotide-binding universal stress protein, UspA family. (151 aa)    
Predicted Functional Partners:
SHO48426.1
Hypothetical protein.
 
    0.936
SHO48427.1
Hypothetical protein.
       0.653
SHO48534.1
Hypothetical protein.
  
     0.651
SHO48533.1
Hypothetical protein.
  
     0.626
SHO48422.1
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
     
 0.623
SHO49106.1
Hypothetical protein.
  
     0.542
SHO49059.1
Hypothetical protein.
  
     0.513
SHO45620.1
Class III cytochrome C family protein.
  
 
 0.509
SHO50639.1
Hypothetical protein.
  
     0.499
SHO50836.1
Hypothetical protein.
  
     0.492
Your Current Organism:
Desulfopila aestuarii
NCBI taxonomy Id: 1121416
Other names: D. aestuarii DSM 18488, Desulfopila aestuarii DSM 18488
Server load: low (18%) [HD]