STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO50981.1Transposase, Mutator family. (94 aa)    
Predicted Functional Partners:
SHO53649.1
Transposase, Mutator family.
 
     0.976
SHO48407.1
Hypothetical protein.
  
     0.773
SHO52429.1
Hypothetical protein.
  
     0.773
SHO52908.1
Hypothetical protein.
  
     0.773
SHO52953.1
Hypothetical protein.
  
     0.773
SHO53588.1
Hypothetical protein.
  
     0.773
SHO53796.1
Hypothetical protein.
  
     0.773
SHO46015.1
Hypothetical protein.
  
     0.772
SHO51264.1
Hypothetical protein.
  
     0.772
SHO53155.1
Hypothetical protein.
  
     0.770
Your Current Organism:
Desulfopila aestuarii
NCBI taxonomy Id: 1121416
Other names: D. aestuarii DSM 18488, Desulfopila aestuarii DSM 18488
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.