STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI31485.1Collagen triple helix repeat-containing protein. (531 aa)    
Predicted Functional Partners:
SDG99832.1
RHS repeat-associated core domain-containing protein.
  
 0.837
SDH62647.1
Collagen triple helix repeat-containing protein.
 
 0.821
SDG42145.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
  
 0.776
SDI63357.1
Transposase, IS4 family.
  
     0.678
SDG56246.1
Subtilase family protein.
  
 0.668
SDG12038.1
4Fe-4S binding domain-containing protein.
  
     0.651
SDH95857.1
Di-and tricarboxylate transporter.
  
   
 0.650
SDG12075.1
Nitrate reductase delta subunit.
  
     0.639
SDG80233.1
Protein of unknown function.
  
     0.625
SDG90870.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
 
 0.622
Your Current Organism:
Desulfosporosinus hippei
NCBI taxonomy Id: 1121419
Other names: D. hippei DSM 8344, Desulfosporosinus hippei DSM 8344
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.