STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK14798.1Response regulator receiver domain-containing protein. (80 aa)    
Predicted Functional Partners:
SHL00934.1
PAS domain S-box-containing protein.
  
 0.997
SHK14746.1
Signal transduction histidine kinase.
 
 0.985
SHK89449.1
PAS domain S-box-containing protein.
  
 0.956
SHK14766.1
Transcriptional regulatory protein, C terminal.
     0.948
SHK62169.1
Signal transduction histidine kinase, nitrogen specific.
  
 0.928
SHK14704.1
Putative ABC transport system permease protein.
 
     0.888
SHK14725.1
Putative ABC transport system ATP-binding protein.
 
     0.871
SHK05294.1
NADH-quinone oxidoreductase subunit F.
   
 
 0.785
SHK17404.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
   
 
 0.785
SHK95958.1
PAS domain S-box-containing protein.
   
 0.726
Your Current Organism:
Desulfotomaculum aeronauticum
NCBI taxonomy Id: 1121421
Other names: D. aeronauticum DSM 10349, Desulfotomaculum aeronauticum DSM 10349
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