STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
whiAHypothetical protein; Involved in cell division and chromosome segregation. (322 aa)    
Predicted Functional Partners:
SHK76513.1
Conserved hypothetical protein, cofD-related; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
 
  
 0.902
SHK75938.1
Ribonuclease BN, tRNA processing enzyme.
       0.814
SHK76530.1
UPF0042 nucleotide-binding protein; Displays ATPase and GTPase activities.
 
  
 0.765
SHK75922.1
RNA polymerase, sigma 54 subunit, RpoN/SigL.
       0.745
SHK98364.1
23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
 
   
 0.710
SHK87341.1
Hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.
  
  
 0.707
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
     
 0.672
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
  
 0.624
SHK08418.1
Uncharacterized protein, UPF0297 family; Belongs to the UPF0297 family.
  
     0.619
SHJ95816.1
Serine/threonine protein kinase.
 
   
 0.617
Your Current Organism:
Desulfotomaculum aeronauticum
NCBI taxonomy Id: 1121421
Other names: D. aeronauticum DSM 10349, Desulfotomaculum aeronauticum DSM 10349
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.