STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000430885_01258Unannotated protein. (327 aa)    
Predicted Functional Partners:
GCA_000430885_02919
Unannotated protein.
  
 0.912
GCA_000430885_01262
Unannotated protein.
 
  
 0.896
GCA_000430885_01259
Unannotated protein.
 
  
 0.853
GCA_000430885_01264
Unannotated protein.
 
 
  0.846
GCA_000430885_01263
Unannotated protein.
 
  
 0.837
GCA_000430885_01261
Unannotated protein.
    
 0.808
GCA_000430885_01260
Unannotated protein.
       0.767
GCA_000430885_00939
Unannotated protein.
  
  
 0.728
GCA_000430885_00232
Unannotated protein.
  
 
 0.721
GCA_000430885_03173
Unannotated protein.
  
     0.700
Your Current Organism:
Desulfallas alcoholivorax
NCBI taxonomy Id: 1121422
Other names: D. alcoholivorax DSM 16058, Desulfallas alcoholivorax DSM 16058, Desulfotomaculum alcoholivorax DSM 16058, Desulfotomaculum alcoholivorax RE35E1, Desulfotomaculum sp. RE35E1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.