STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000711975_01159Unannotated protein. (141 aa)    
Predicted Functional Partners:
GCA_000711975_00984
Unannotated protein.
   
    0.555
GCA_000711975_00581
Unannotated protein.
   
  
 0.489
GCA_000711975_01160
Unannotated protein.
       0.480
GCA_000711975_01113
Unannotated protein.
  
  
 0.422
GCA_000711975_00052
Unannotated protein.
  
  
 0.421
GCA_000711975_01334
Unannotated protein.
   
    0.416
GCA_000711975_00459
Unannotated protein.
  
  
 0.403
Your Current Organism:
Desulfohalotomaculum alkaliphilum
NCBI taxonomy Id: 1121423
Other names: D. alkaliphilum DSM 12257, Desulfohalotomaculum alkaliphilum DSM 12257, Desulfotomaculum alkaliphilum DSM 12257
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.