STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI96694.1Hypothetical protein. (298 aa)    
Predicted Functional Partners:
SHI96663.1
Biotin synthase.
 
   
 0.927
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
 
     0.806
SHI96769.1
Putative redox protein.
       0.737
SHJ63410.1
Lipoate-protein ligase A.
 
     0.659
SHI96810.1
solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.585
SHI96848.1
Dihydrolipoamide dehydrogenase.
 
     0.528
Your Current Organism:
Desulfofundulus thermosubterraneus
NCBI taxonomy Id: 1121432
Other names: D. thermosubterraneus DSM 16057, Desulfofundulus thermosubterraneus DSM 16057, Desulfotomaculum thermosubterraneum DSM 16057
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.