STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ01250.1UDPglucose 6-dehydrogenase. (456 aa)    
Predicted Functional Partners:
SHJ28287.1
UTP--glucose-1-phosphate uridylyltransferase.
 
 0.976
SHJ73219.1
Undecaprenyl-phosphate galactose phosphotransferase.
 
 
 0.943
SHI89475.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.941
SHJ53156.1
dTDP-glucose 4,6-dehydratase.
 
 0.907
SHJ55225.1
Nucleotidyltransferase.
  
 
 0.899
SHI89359.1
Glucose-1-phosphate thymidylyltransferase.
  
 
 0.887
SHJ68730.1
Nucleotidyl transferase.
  
 
 0.887
SHI63845.1
dTDP-4-dehydrorhamnose 3,5-epimerase.
  
  
 0.859
SHI89390.1
dTDP-4-dehydrorhamnose 3,5-epimerase.
  
  
 0.859
SHI37359.1
NADH dehydrogenase.
 
 0.855
Your Current Organism:
Desulfofundulus thermosubterraneus
NCBI taxonomy Id: 1121432
Other names: D. thermosubterraneus DSM 16057, Desulfofundulus thermosubterraneus DSM 16057, Desulfotomaculum thermosubterraneum DSM 16057
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.