STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ05589.1Multidrug resistance protein. (404 aa)    
Predicted Functional Partners:
SHI46285.1
Prephenate dehydratase.
   
 
 0.579
SHJ70007.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.513
SHJ31897.1
Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
  
   
 0.492
SHI94475.1
Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
  
   
 0.447
SHI60285.1
Sugar phosphate permease.
  
 
 0.434
SHJ39749.1
Thymidylate synthase.
  
     0.430
SHJ23620.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.
  
     0.426
SHJ75789.1
Hypothetical protein.
  
     0.404
Your Current Organism:
Desulfofundulus thermosubterraneus
NCBI taxonomy Id: 1121432
Other names: D. thermosubterraneus DSM 16057, Desulfofundulus thermosubterraneus DSM 16057, Desulfotomaculum thermosubterraneum DSM 16057
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.