STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620765_00757Unannotated protein. (344 aa)    
Predicted Functional Partners:
GCA_000620765_00758
Unannotated protein.
    
 0.932
GCA_000620765_00756
Unannotated protein.
       0.612
GCA_000620765_00759
Unannotated protein.
       0.565
GCA_000620765_00760
Unannotated protein.
       0.565
GCA_000620765_02494
Unannotated protein.
     
 0.564
GCA_000620765_00693
Unannotated protein.
  
     0.455
GCA_000620765_01615
Unannotated protein.
  
   
 0.443
GCA_000620765_00634
Unannotated protein.
  
     0.418
Your Current Organism:
Desulfovermiculus halophilus
NCBI taxonomy Id: 1121433
Other names: D. halophilus DSM 18834, Desulfovermiculus halophilus DSM 18834
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.