STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620765_02633Unannotated protein. (63 aa)    
Predicted Functional Partners:
GCA_000620765_02632
Unannotated protein.
       0.800
GCA_000620765_01387
Unannotated protein.
     
 0.651
GCA_000620765_01893
Unannotated protein.
   
 
 0.649
GCA_000620765_02010
Unannotated protein.
     
 0.613
GCA_000620765_01761
Unannotated protein.
     
 0.605
GCA_000620765_02666
Unannotated protein.
    
  0.580
GCA_000620765_02009
Unannotated protein.
     
 0.539
GCA_000620765_01916
Unannotated protein.
   
 
  0.494
GCA_000620765_02631
Unannotated protein.
       0.472
GCA_000620765_00976
Unannotated protein.
  
  
 0.466
Your Current Organism:
Desulfovermiculus halophilus
NCBI taxonomy Id: 1121433
Other names: D. halophilus DSM 18834, Desulfovermiculus halophilus DSM 18834
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.