STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsat_0029AMP-dependent synthetase and ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (438 aa)    
Predicted Functional Partners:
dsat_0030
KEGG: dba:Dbac_0999 ABC transporter-like protein; PFAM: ABC transporter related protein; SMART: AAA ATPase.
 
 
  0.705
dsat_0032
PFAM: ABC-type transporter, integral membrane subunit; KEGG: dma:DMR_11370 ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
    0.640
dsat_0033
PFAM: ABC-type transporter, integral membrane subunit; KEGG: dba:Dbac_0996 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
    0.637
dsat_0031
KEGG: dma:DMR_11360 ABC transporter ATP-binding protein; PFAM: ABC transporter related protein; SMART: AAA ATPase.
 
    0.633
dsat_0891
PFAM: amino acid-binding ACT domain-containing protein; KEGG: drt:Dret_1138 amino acid-binding ACT domain-containing protein.
 
   0.605
dsat_0034
KEGG: dma:DMR_11390 ABC transporter substrate binding protein precursor.
 
    0.589
dsat_1193
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
   
 0.570
dsat_1897
PFAM: Aldehyde Dehydrogenase; KEGG: rce:RC1_3767 aldehyde dehydrogenase, putative; Belongs to the aldehyde dehydrogenase family.
   
 0.561
dsat_2833
Betaine aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid.
   
 0.561
dsat_0035
KEGG: dma:DMR_11400 ABC transporter substrate binding protein precursor.
 
    0.546
Your Current Organism:
Desulfovibrio alkalitolerans
NCBI taxonomy Id: 1121439
Other names: D. alkalitolerans DSM 16529, Desulfovibrio alkalitolerans DSM 16529
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.