STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsat_0248Hypothetical protein; KEGG: mem:Memar_1718 NHL repeat-containing protein. (481 aa)    
Predicted Functional Partners:
msrA
Peptide methionine sulfoxide reductase msrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.992
dsat_0336
KEGG: dsa:Desal_0370 cytochrome c family protein.
  
 0.990
dsat_2101
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein, Pyruvate/ketoisovalerate oxidoreductase, Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein, thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: dvl:Dvul_0348 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein.
  
 0.970
dsat_0488
KEGG: gsu:GSU2811 cytochrome c Hsc.
  
 
 0.941
dsat_0587
PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, FAD-dependent pyridine nucleotide-disulfide oxidoreductase, pyridine nucleotide-disulfide oxidoreductase dimerization region; KEGG: drt:Dret_1498 pyridine nucleotide-disulfide oxidoreductase dimerization region.
  
 0.900
dsat_1076
PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, pyridine nucleotide-disulfide oxidoreductase dimerization region, FAD-dependent pyridine nucleotide-disulfide oxidoreductase; KEGG: das:Daes_1395 FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
  
 0.900
dsat_2358
PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, pyridine nucleotide-disulfide oxidoreductase dimerization region, FAD-dependent pyridine nucleotide-disulfide oxidoreductase; KEGG: das:Daes_2165 FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
  
 0.900
dsat_0332
Rhodanese-like protein; KEGG: dsa:Desal_0374 rhodanese domain protein; PFAM: Rhodanese-like protein; SMART: Rhodanese-like protein.
    
 0.858
dsat_0787
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen, Peroxiredoxin; KEGG: dsa:Desal_0033 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
  
 0.855
dsat_0299
KEGG: dvm:DvMF_1394 hypothetical protein.
   
 
 0.852
Your Current Organism:
Desulfovibrio alkalitolerans
NCBI taxonomy Id: 1121439
Other names: D. alkalitolerans DSM 16529, Desulfovibrio alkalitolerans DSM 16529
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