STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsat_0341PFAM: Dissimilatory sulfite reductase D; KEGG: das:Daes_2983 dissimilatory sulfite reductase D. (97 aa)    
Predicted Functional Partners:
dsat_0340
KEGG: dsa:Desal_0788 sulfite reductase, dissimilatory-type beta subunit; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: nitrite and sulfite reductase 4Fe-4S region, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein, nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein.
 
 
 
 0.983
dsat_0339
KEGG: dvm:DvMF_1553 sulfite reductase, dissimilatory-type subunit alpha; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulfite reductase 4Fe-4S region.
 
 
 
 0.966
dsat_1688
PFAM: protein of unknown function UPF0153; KEGG: das:Daes_2029 hypothetical protein.
 
     0.785
dsat_0338
KEGG: dba:Dbac_2517 hypothetical protein.
  
     0.762
dsat_1689
KEGG: dvl:Dvul_0115 hypothetical protein.
 
     0.752
dsat_1575
KEGG: dma:DMR_16410 hypothetical protein.
  
     0.698
dsat_1687
PFAM: 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein; KEGG: das:Daes_2030 ferredoxin I.
 
  
 0.691
dsat_1098
PFAM: Polysulfide reductase NrfD; KEGG: dsa:Desal_1045 polysulphide reductase NrfD.
  
     0.680
dsat_2265
KEGG: das:Daes_0722 hypothetical protein.
  
     0.669
dsat_0758
PFAM: protein of unknown function UPF0153; KEGG: das:Daes_2986 hypothetical protein.
  
     0.616
Your Current Organism:
Desulfovibrio alkalitolerans
NCBI taxonomy Id: 1121439
Other names: D. alkalitolerans DSM 16529, Desulfovibrio alkalitolerans DSM 16529
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