STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsat_0387KEGG: dma:DMR_04340 efflux system protein; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein. (1051 aa)    
Predicted Functional Partners:
dsat_0388
KEGG: dma:DMR_04350 efflux system protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.993
dsat_2812
KEGG: dvu:DVU0437 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.968
dsat_1134
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: dsa:Desal_1095 efflux transporter RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.953
dsat_1135
PFAM: outer membrane efflux protein; KEGG: dsa:Desal_2621 outer membrane efflux protein.
 0.942
dsat_2028
KEGG: dde:Dde_1562 secretion protein HlyD.
  
 0.853
dsat_0780
KEGG: dsa:Desal_1789 efflux transporter RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: Protein of unknown function DUF3347; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.843
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
   
   0.802
dsat_0778
PFAM: outer membrane efflux protein; KEGG: dsa:Desal_1790 outer membrane efflux protein.
  
 0.781
dsat_0385
PFAM: phospholipase C/P1 nuclease; KEGG: das:Daes_2193 hypothetical protein.
       0.773
dsat_1267
KEGG: dma:DMR_08170 secretion protein HlyD family protein.
 
  
 0.770
Your Current Organism:
Desulfovibrio alkalitolerans
NCBI taxonomy Id: 1121439
Other names: D. alkalitolerans DSM 16529, Desulfovibrio alkalitolerans DSM 16529
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