STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsat_0551KEGG: dba:Dbac_2042 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver. (149 aa)    
Predicted Functional Partners:
dsat_2115
Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS fold domain protein, response regulator receiver; KEGG: das:Daes_2894 PAS sensor protein; SMART: ATP-binding region ATPase domain protein, PAS domain containing protein, histidine kinase A domain protein.
 
 0.965
dsat_0581
Signal transduction histidine kinase with CheB and CheR activity; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
0.940
dsat_0670
PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, PAS fold-4 domain protein, PAS fold domain protein, histidine kinase A domain protein; KEGG: das:Daes_0516 PAS sensor protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS domain containing protein.
 
 0.928
dsat_1645
Response regulator receiver modulated diguanylate cyclase; TIGRFAM: diguanylate cyclase, PAS sensor protein; PFAM: GGDEF domain containing protein, PAS fold-3 domain protein, response regulator receiver, histidine kinase A domain protein; KEGG: dma:DMR_34900 putative two-component hybrid sensor and regulator; SMART: GGDEF domain containing protein, histidine kinase A domain protein, response regulator receiver, PAS domain containing protein.
 
 0.874
dsat_1969
Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, Cache domain protein, histidine kinase A domain protein, PAS fold-4 domain protein; KEGG: dba:Dbac_0052 PAS/PAC sensor signal transduction histidine kinase; SMART: Cache domain protein, ATP-binding region ATPase domain protein, PAS domain containing protein.
 
 
  0.857
dsat_2416
KEGG: sta:STHERM_c02220 histidine kinase; PFAM: response regulator receiver; SMART: response regulator receiver.
 
0.857
dsat_0306
Response regulator receiver protein; KEGG: sur:STAUR_6958 sensor protein; PFAM: ATP-binding region ATPase domain protein, response regulator receiver; SMART: response regulator receiver, ATP-binding region ATPase domain protein.
 
 
0.850
dsat_0426
Integral membrane sensor hybrid histidine kinase; KEGG: sta:STHERM_c16510 autoinducer 2 sensor kinase/phosphatase LuxQ; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, response regulator receiver; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, response regulator receiver.
 
 0.845
dsat_0669
PFAM: Hpt domain protein; KEGG: tmz:Tmz1t_1730 multi-sensor hybrid histidine kinase.
  
 0.830
dsat_0889
PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, response regulator receiver, histidine kinase A domain protein, Hpt domain protein; KEGG: dma:DMR_25470 two-component hybrid sensor and regulator; SMART: response regulator receiver, ATP-binding region ATPase domain protein, PAS domain containing protein, histidine kinase A domain protein.
  
0.830
Your Current Organism:
Desulfovibrio alkalitolerans
NCBI taxonomy Id: 1121439
Other names: D. alkalitolerans DSM 16529, Desulfovibrio alkalitolerans DSM 16529
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.