STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsat_0633Hypothetical protein; KEGG: dao:Desac_1130 phosphonate ABC transporter, periplasmic phosphonate-binding protein. (380 aa)    
Predicted Functional Partners:
dsat_0642
TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: gur:Gura_0350 phosphonate ABC transporter, periplasmic phosphonate-binding protein.
  
  
 
0.973
phnC
Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
 
 0.966
dsat_0632
Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, PAS fold-4 domain protein, histidine kinase A domain protein, histidine kinase HAMP region domain protein; KEGG: drt:Dret_0229 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS domain containing protein.
 
  
  0.951
dsat_0735
KEGG: axy:AXYL_05569 phosphonate ABC transporter permease; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit.
 
 
 0.901
dsat_0736
KEGG: dba:Dbac_0858 phosphonate ABC transporter, inner membrane subunit; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit.
 
 
 0.900
dsat_0426
Integral membrane sensor hybrid histidine kinase; KEGG: sta:STHERM_c16510 autoinducer 2 sensor kinase/phosphatase LuxQ; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, response regulator receiver; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, response regulator receiver.
  
 
 0.746
dsat_1649
Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein, GAF domain protein, ATP-binding region ATPase domain protein; KEGG: dma:DMR_27220 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein, PAC repeat-containing protein, PAS domain containing protein, histidine kinase A domain protein, GAF domain protein.
  
 
 0.745
dsat_0738
TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: dvm:DvMF_0598 phosphonate ABC transporter periplasmic phosphonate-binding protein.
  
  
 
0.742
dsat_2240
KEGG: dba:Dbac_1382 histidine kinase; PFAM: Metal-dependent hydrolase HDOD, ATP-binding region ATPase domain protein, response regulator receiver, histidine kinase A domain protein; SMART: response regulator receiver, ATP-binding region ATPase domain protein, histidine kinase A domain protein.
    
 0.741
dsat_2416
KEGG: sta:STHERM_c02220 histidine kinase; PFAM: response regulator receiver; SMART: response regulator receiver.
  
 
 0.736
Your Current Organism:
Desulfovibrio alkalitolerans
NCBI taxonomy Id: 1121439
Other names: D. alkalitolerans DSM 16529, Desulfovibrio alkalitolerans DSM 16529
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.