STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsat_0673PFAM: protein of unknown function DUF1641; KEGG: dma:DMR_13130 hypothetical protein. (225 aa)    
Predicted Functional Partners:
dsat_0674
PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain; KEGG: dma:DMR_13140 FAD-dependent pyridine nucleotide-disulphide oxidoreductase domain protein.
  
    0.870
dsat_1434
KEGG: dvl:Dvul_1246 hydrogenase (NiFe) small subunit HydA; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit.
   
   0.794
dsat_1435
PFAM: nickel-dependent hydrogenase large subunit; KEGG: drt:Dret_0266 nickel-dependent hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
   
   0.693
dsat_0015
PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, FAD-dependent pyridine nucleotide-disulfide oxidoreductase, pyridine nucleotide-disulfide oxidoreductase dimerization region; KEGG: dps:DP0550 NADH oxidase.
  
    0.512
dsat_1463
PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain; KEGG: dma:DMR_13140 FAD-dependent pyridine nucleotide-disulphide oxidoreductase domain protein.
  
    0.498
Your Current Organism:
Desulfovibrio alkalitolerans
NCBI taxonomy Id: 1121439
Other names: D. alkalitolerans DSM 16529, Desulfovibrio alkalitolerans DSM 16529
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