Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| acpP | atpH | dsat_0463 | dsat_0223 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.767 |
| acpP | dsat_0546 | dsat_0463 | dsat_0546 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | PFAM: Protein of unknown function DUF2867; KEGG: dao:Desac_0676 NAD-dependent epimerase/dehydratase. | 0.995 |
| acpP | dsat_0817 | dsat_0463 | dsat_0817 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | PFAM: peptidase M16 domain protein; KEGG: dma:DMR_38350 putative M16B family peptidase. | 0.898 |
| acpP | dsat_0917 | dsat_0463 | dsat_0917 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: dma:DMR_02760 putative Ech hydrogenase subunit EchD. | 0.994 |
| acpP | dsat_1095 | dsat_0463 | dsat_1095 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | PFAM: Cytochrome c, class III, conserved region; KEGG: dsa:Desal_1042 hypothetical protein. | 0.454 |
| acpP | dsat_2048 | dsat_0463 | dsat_2048 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | KEGG: dma:DMR_27830 NADH-quinone oxidoreductase chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I). | 0.991 |
| acpP | dsat_2057 | dsat_0463 | dsat_2057 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: dvm:DvMF_1595 NADH dehydrogenase (ubiquinone) 30 kDa subunit. | 0.994 |
| acpP | nuoB | dsat_0463 | dsat_2058 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | NAD(P)H-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.997 |
| acpP | nuoD | dsat_0463 | dsat_2056 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | NAD(P)H-quinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. | 0.993 |
| acpP | sucD | dsat_0463 | dsat_1820 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | ATP-grasp domain protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.876 |
| atpH | acpP | dsat_0223 | dsat_0463 | ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.767 |
| atpH | dsat_0546 | dsat_0223 | dsat_0546 | ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | PFAM: Protein of unknown function DUF2867; KEGG: dao:Desac_0676 NAD-dependent epimerase/dehydratase. | 0.474 |
| atpH | dsat_0817 | dsat_0223 | dsat_0817 | ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | PFAM: peptidase M16 domain protein; KEGG: dma:DMR_38350 putative M16B family peptidase. | 0.874 |
| atpH | dsat_0917 | dsat_0223 | dsat_0917 | ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: dma:DMR_02760 putative Ech hydrogenase subunit EchD. | 0.856 |
| atpH | dsat_1095 | dsat_0223 | dsat_1095 | ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | PFAM: Cytochrome c, class III, conserved region; KEGG: dsa:Desal_1042 hypothetical protein. | 0.424 |
| atpH | dsat_2057 | dsat_0223 | dsat_2057 | ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: dvm:DvMF_1595 NADH dehydrogenase (ubiquinone) 30 kDa subunit. | 0.856 |
| atpH | nuoB | dsat_0223 | dsat_2058 | ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | NAD(P)H-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.703 |
| atpH | nuoD | dsat_0223 | dsat_2056 | ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | NAD(P)H-quinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. | 0.844 |
| atpH | sucD | dsat_0223 | dsat_1820 | ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | ATP-grasp domain protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.979 |
| dsat_0546 | acpP | dsat_0546 | dsat_0463 | PFAM: Protein of unknown function DUF2867; KEGG: dao:Desac_0676 NAD-dependent epimerase/dehydratase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.995 |
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