STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsat_1045KEGG: dma:DMR_22420 ABC transporter ATP-binding protein; PFAM: ABC transporter related protein; SMART: AAA ATPase. (266 aa)    
Predicted Functional Partners:
dsat_1046
PFAM: ABC-type transporter, integral membrane subunit; KEGG: dma:DMR_22430 ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
dsat_0032
PFAM: ABC-type transporter, integral membrane subunit; KEGG: dma:DMR_11370 ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.991
dsat_1165
PFAM: ABC-type transporter, integral membrane subunit; KEGG: dma:DMR_45580 branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.990
dsat_0804
PFAM: ABC-type transporter, integral membrane subunit; KEGG: dma:DMR_09060 ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.988
dsat_1047
PFAM: ABC-type transporter, integral membrane subunit; KEGG: dma:DMR_22440 ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.983
dsat_2014
PFAM: ABC-type transporter, integral membrane subunit; KEGG: dma:DMR_12080 ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.981
dsat_1048
KEGG: dma:DMR_22450 ABC transporter substrate binding protein precursor.
 
 
  0.947
dsat_2015
PFAM: ABC-type transporter, integral membrane subunit; KEGG: dvm:DvMF_1165 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.943
dsat_1163
KEGG: dma:DMR_45600 branched-chain amino acid ABC transporter substrate binding protein precursor.
 
 
  0.929
dsat_1044
KEGG: dma:DMR_22410 ABC transporter ATP-binding protein; PFAM: ABC transporter related protein; SMART: AAA ATPase.
 
 
 
0.914
Your Current Organism:
Desulfovibrio alkalitolerans
NCBI taxonomy Id: 1121439
Other names: D. alkalitolerans DSM 16529, Desulfovibrio alkalitolerans DSM 16529
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