STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsat_1096PFAM: molybdopterin oxidoreductase, molybdopterin dinucleotide-binding region; KEGG: dvm:DvMF_2689 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (713 aa)    
Predicted Functional Partners:
dsat_1097
PFAM: 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; KEGG: dde:Dde_2934 molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit.
 0.992
dsat_1095
PFAM: Cytochrome c, class III, conserved region; KEGG: dsa:Desal_1042 hypothetical protein.
 
 
 0.987
dsat_1098
PFAM: Polysulfide reductase NrfD; KEGG: dsa:Desal_1045 polysulphide reductase NrfD.
 
 0.978
dsat_1159
PFAM: methyl-viologen-reducing hydrogenase delta subunit, Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; KEGG: dma:DMR_05420 quinone-interacting membrane-bound oxidoreductase complex subunit B.
  
 0.961
dsat_2185
PFAM: methyl-viologen-reducing hydrogenase delta subunit, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; KEGG: dku:Desku_1949 methyl-viologen-reducing hydrogenase subunit delta.
   
 0.945
dsat_0638
PFAM: 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; KEGG: dsy:DSY4132 putative oxidoreductase iron-sulfur subunit.
 
  0.901
dsat_2101
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein, Pyruvate/ketoisovalerate oxidoreductase, Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein, thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: dvl:Dvul_0348 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein.
  
 
 0.884
dsat_0322
PFAM: 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein; KEGG: dvl:Dvul_1778 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 0.877
dsat_0685
KEGG: dvm:DvMF_1613 formylmethanofuran dehydrogenase subunit E region; PFAM: formylmethanofuran dehydrogenase subunit E region, molybdopterin binding domain-containing protein; SMART: molybdopterin binding domain-containing protein.
 
 
 0.812
dsat_2182
PFAM: 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein, Nitrate reductase gamma subunit; KEGG: dal:Dalk_5066 4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
 
 0.808
Your Current Organism:
Desulfovibrio alkalitolerans
NCBI taxonomy Id: 1121439
Other names: D. alkalitolerans DSM 16529, Desulfovibrio alkalitolerans DSM 16529
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