STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsat_1133PFAM: acriflavin resistance protein; KEGG: das:Daes_2482 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1040 aa)    
Predicted Functional Partners:
dsat_1134
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: dsa:Desal_1095 efflux transporter RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.982
dsat_0388
KEGG: dma:DMR_04350 efflux system protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.827
dsat_1135
PFAM: outer membrane efflux protein; KEGG: dsa:Desal_2621 outer membrane efflux protein.
 0.816
dsat_2812
KEGG: dvu:DVU0437 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.811
dsat_0778
PFAM: outer membrane efflux protein; KEGG: dsa:Desal_1790 outer membrane efflux protein.
  
 0.781
dsat_0780
KEGG: dsa:Desal_1789 efflux transporter RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: Protein of unknown function DUF3347; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.732
dsat_2028
KEGG: dde:Dde_1562 secretion protein HlyD.
  
 0.712
yajC
Preprotein translocase, YajC subunit; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.
  
 
 
 0.683
dsat_0795
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: dde:Dde_0549 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.576
secD
SecD export membrane protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
  
  
 0.520
Your Current Organism:
Desulfovibrio alkalitolerans
NCBI taxonomy Id: 1121439
Other names: D. alkalitolerans DSM 16529, Desulfovibrio alkalitolerans DSM 16529
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