STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsat_1156KEGG: dvl:Dvul_2137 adenylylsulfate reductase subunit beta; TIGRFAM: adenylylsulfate reductase, beta subunit; PFAM: Adenylylsulphate reductase, beta subunit, C-terminal, 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein. (168 aa)    
Predicted Functional Partners:
dsat_1157
KEGG: dvl:Dvul_2136 adenylylsulfate reductase subunit alpha; TIGRFAM: adenylylsulfate reductase, alpha subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein.
 
 0.999
dsat_2183
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein, Fumarate reductase/succinate dehydrogenase flavoprotein-like protein; KEGG: dma:DMR_29670 oxidoreductase.
 
 0.990
dsat_1155
KEGG: dvm:DvMF_0074 sulfate adenylyltransferase; TIGRFAM: sulfate adenylyltransferase; PFAM: Sulphate adenylyltransferase catalytic domain, ATP-sulfurylase PUA-like domain.
 
 
 0.976
dsat_0339
KEGG: dvm:DvMF_1553 sulfite reductase, dissimilatory-type subunit alpha; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulfite reductase 4Fe-4S region.
  
 
 0.970
dsat_0340
KEGG: dsa:Desal_0788 sulfite reductase, dissimilatory-type beta subunit; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: nitrite and sulfite reductase 4Fe-4S region, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein, nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein.
  
 
 0.968
dsat_2101
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein, Pyruvate/ketoisovalerate oxidoreductase, Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein, thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: dvl:Dvul_0348 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein.
  
 0.951
dsat_1159
PFAM: methyl-viologen-reducing hydrogenase delta subunit, Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; KEGG: dma:DMR_05420 quinone-interacting membrane-bound oxidoreductase complex subunit B.
 
 
 0.914
dsat_0985
KEGG: dsa:Desal_0721 fumarate reductase flavoprotein subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein, Fumarate reductase/succinate dehydrogenase flavoprotein-like protein.
  
 0.892
dsat_2284
2-oxoacid:acceptor oxidoreductase, alpha subunit; KEGG: das:Daes_1447 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein, Pyruvate/ketoisovalerate oxidoreductase.
  
 0.854
dsat_1158
KEGG: dma:DMR_05410 quinone-interacting membrane-bound oxidoreductase complex subunit A.
 
 
  0.845
Your Current Organism:
Desulfovibrio alkalitolerans
NCBI taxonomy Id: 1121439
Other names: D. alkalitolerans DSM 16529, Desulfovibrio alkalitolerans DSM 16529
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.