STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsat_1266KEGG: dat:HRM2_20240 hypothetical protein; TIGRFAM: PEP motif putative anchor domain protein; PFAM: PEP motif putative anchor domain protein. (280 aa)    
Predicted Functional Partners:
dsat_1267
KEGG: dma:DMR_08170 secretion protein HlyD family protein.
       0.401
dsat_1268
KEGG: dde:Dde_0826 ATPase; PFAM: ABC transporter related protein; SMART: AAA ATPase.
       0.401
dsat_1269
PFAM: MacB-like periplasmic core domain, protein of unknown function DUF214; KEGG: dvl:Dvul_3083 hypothetical protein.
       0.401
Your Current Organism:
Desulfovibrio alkalitolerans
NCBI taxonomy Id: 1121439
Other names: D. alkalitolerans DSM 16529, Desulfovibrio alkalitolerans DSM 16529
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.