STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsat_1357TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dde:Dde_2680 diguanylate cyclase; SMART: GGDEF domain containing protein. (185 aa)    
Predicted Functional Partners:
dsat_0961
Diguanylate cyclase with PAS/PAC and GAF sensor; TIGRFAM: diguanylate cyclase, PAS sensor protein; PFAM: GGDEF domain containing protein, response regulator receiver, PAS domain containing protein; KEGG: tmz:Tmz1t_2654 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: GGDEF domain containing protein, PAS domain containing protein, GAF domain protein.
 
 0.955
dsat_2854
SMART: metal-dependent phosphohydrolase HD region; KEGG: dma:DMR_28350 hypothetical protein.
 
 
  0.947
dsat_1649
Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein, GAF domain protein, ATP-binding region ATPase domain protein; KEGG: dma:DMR_27220 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein, PAC repeat-containing protein, PAS domain containing protein, histidine kinase A domain protein, GAF domain protein.
 
 0.943
dsat_2815
KEGG: dma:DMR_35490 response regulator receiver protein; PFAM: response regulator receiver, metal-dependent phosphohydrolase HD sub domain-containing protein; SMART: response regulator receiver, metal-dependent phosphohydrolase HD region.
 
 
  0.927
dsat_1971
KEGG: dba:Dbac_2325 response regulator receiver modulated metal dependent phosphohydrolase; PFAM: response regulator receiver, metal-dependent phosphohydrolase HD sub domain-containing protein; SMART: response regulator receiver, metal-dependent phosphohydrolase HD region.
 
 
  0.914
dsat_2239
TIGRFAM: metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain-containing protein, response regulator receiver; KEGG: drt:Dret_0887 response regulator receiver modulated metal dependent phosphohydrolase; SMART: response regulator receiver, metal-dependent phosphohydrolase HD region.
 
 
  0.914
dsat_2438
KEGG: dma:DMR_02640 OmpR family two-component response regulator; PFAM: response regulator receiver, transcriptional regulator domain-containing protein; SMART: response regulator receiver, transcriptional regulator domain-containing protein.
 
 
 
  0.904
dsat_1855
TIGRFAM: metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain-containing protein; KEGG: aac:Aaci_0362 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region.
 
 
  0.895
dsat_0410
Diguanylate phosphodiesterase; KEGG: das:Daes_0959 EAL domain-containing protein; PFAM: EAL domain-containing protein; SMART: EAL domain-containing protein.
 
 
  0.888
dsat_2343
KEGG: dma:DMR_42960 response regulator receiver protein; PFAM: protein phosphatase 2C domain protein, response regulator receiver; SMART: response regulator receiver, protein phosphatase 2C domain protein.
 
 
 
 0.886
Your Current Organism:
Desulfovibrio alkalitolerans
NCBI taxonomy Id: 1121439
Other names: D. alkalitolerans DSM 16529, Desulfovibrio alkalitolerans DSM 16529
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.