STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsat_1482PFAM: CBS domain containing protein; KEGG: dsa:Desal_3507 CBS domain containing protein. (174 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 0.904
dsat_1483
PFAM: sodium/sulfate symporter; KEGG: dak:DaAHT2_2515 citrate transporter.
 
     0.857
dsat_1484
PFAM: transferase hexapeptide repeat containing protein; KEGG: dsa:Desal_3509 hexapaptide repeat-containing transferase.
 
     0.843
dsat_0557
KEGG: dbr:Deba_0061 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein.
  
     0.750
dsat_1638
KEGG: dsa:Desal_2372 hypothetical protein.
  
     0.749
dsat_2568
PFAM: histidine kinase A domain protein; KEGG: dol:Dole_2332 histidine kinase A domain-containing protein.
  
    0.744
dsat_2571
KEGG: dat:HRM2_40350 response regulator receiver domain protein; PFAM: response regulator receiver, Cytidylate kinase-like family; SMART: response regulator receiver.
 
     0.744
dsat_1639
PFAM: protein of unknown function DUF81; KEGG: dvl:Dvul_2726 hypothetical protein.
  
     0.715
dsat_2271
KEGG: das:Daes_3132 homocysteine S-methyltransferase; PFAM: homocysteine S-methyltransferase, dihydropteroate synthase DHPS, cobalamin B12-binding domain protein, Methionine synthase B12-binding module cap domain protein; SMART: Methionine synthase B12-binding module cap domain protein.
  
 
 0.712
dsat_2570
Integral membrane sensor signal transduction histidine kinase; KEGG: das:Daes_0065 ATPase ATP-binding domain-containing protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein.
  
     0.678
Your Current Organism:
Desulfovibrio alkalitolerans
NCBI taxonomy Id: 1121439
Other names: D. alkalitolerans DSM 16529, Desulfovibrio alkalitolerans DSM 16529
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.