STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsat_1627PFAM: sodium/hydrogen exchanger, TrkA-N domain protein; KEGG: drt:Dret_1189 sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (525 aa)    
Predicted Functional Partners:
dsat_1081
Cation transporter; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.
  
 
 0.845
dsat_1597
PFAM: cation transporter; KEGG: dma:DMR_01730 putative potassium uptake system membrane components.
  
 
 0.845
dsat_1628
PFAM: aminotransferase class I and II; KEGG: dba:Dbac_2987 class I and II aminotransferase.
  
    0.762
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
  0.739
dsat_2332
KEGG: dde:Dde_3159 flagellar basal-body rod protein; TIGRFAM: flagellar basal-body rod protein FlgF, flagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein, flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.681
dsat_2587
PFAM: molybdopterin biosynthesis MoaE protein; KEGG: das:Daes_0921 molybdopterin biosynthesis MoaE protein.
  
    0.664
dsat_0261
KEGG: dsa:Desal_0251 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrinogen III synthase HEM4, Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase.
  
    0.598
dsat_0582
PFAM: Citrate transporter, TrkA-C domain protein; KEGG: dba:Dbac_1945 Citrate transporter.
  
  
 0.598
dsat_1824
PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: ssm:Spirs_3784 amino acid permease-associated region.
   
 
 0.598
nfo
Endonuclease 4; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.
  
  
 0.544
Your Current Organism:
Desulfovibrio alkalitolerans
NCBI taxonomy Id: 1121439
Other names: D. alkalitolerans DSM 16529, Desulfovibrio alkalitolerans DSM 16529
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