STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsat_1895PFAM: Capsule polysaccharide biosynthesis protein; KEGG: cps:CPS_2099 hypothetical protein. (498 aa)    
Predicted Functional Partners:
dsat_1899
KEGG: rce:RC1_3771 N-acetylneuraminic acid synthase; PFAM: N-acetylneuraminic acid synthase domain-containing protein, SAF domain protein; SMART: SAF domain protein.
 
   
 0.813
dsat_1894
KEGG: dal:Dalk_1665 hypothetical protein.
       0.803
dsat_1896
KEGG: rlg:Rleg_0444 transketolase; PFAM: Transketolase domain-containing protein, Transketolase central region; SMART: Transketolase central region.
       0.746
dsat_1897
PFAM: Aldehyde Dehydrogenase; KEGG: rce:RC1_3767 aldehyde dehydrogenase, putative; Belongs to the aldehyde dehydrogenase family.
       0.746
dsat_1898
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpe:RPE_4235 short-chain dehydrogenase/reductase SDR.
       0.717
dsat_1889
KEGG: dal:Dalk_1661 N-acylneuraminate-9-phosphate synthase; PFAM: N-acetylneuraminic acid synthase domain-containing protein, SAF domain protein; SMART: SAF domain protein.
 
   
 0.679
dsat_1903
PFAM: acylneuraminate cytidylyltransferase; KEGG: atm:ANT_06460 putative N-acylneuraminate cytidylyltransferase.
 
   
 0.671
dsat_1891
PFAM: acylneuraminate cytidylyltransferase; KEGG: dal:Dalk_1663 acylneuraminate cytidylyltransferase.
 
   
 0.664
dsat_1900
KEGG: dal:Dalk_1675 ABC transporter; PFAM: ABC transporter related protein, ABC transporter transmembrane region; SMART: AAA ATPase.
       0.643
dsat_1888
KEGG: dal:Dalk_1660 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; PFAM: UDP-N-acetylglucosamine 2-epimerase.
 
     0.607
Your Current Organism:
Desulfovibrio alkalitolerans
NCBI taxonomy Id: 1121439
Other names: D. alkalitolerans DSM 16529, Desulfovibrio alkalitolerans DSM 16529
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