STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsat_1920Hypothetical protein. (57 aa)    
Predicted Functional Partners:
dsat_1921
PFAM: protein of unknown function DUF1018.
       0.773
dsat_1922
PFAM: Mor transcription activator domain protein; KEGG: dvu:DVU2696 hypothetical protein.
       0.773
dsat_1923
Hypothetical protein.
       0.732
dsat_1919
Hypothetical protein.
       0.714
dsat_1924
PFAM: protein of unknown function DUF847, Peptidoglycan binding domain-containing protein; KEGG: bph:Bphy_7163 hypothetical protein.
       0.456
dsat_1925
KEGG: nhl:Nhal_0998 hypothetical protein.
       0.456
dsat_1926
KEGG: cvi:CV_2143 hypothetical protein.
       0.456
dsat_1927
KEGG: sat:SYN_02306 putative cytoplasmic protein.
       0.456
dsat_1928
PFAM: Protein of unknown function DUF3486; KEGG: bcj:BCAS0529 hypothetical protein.
       0.456
dsat_1918
KEGG: rce:RC1_1137 phage-related hypothetical protein.
       0.439
Your Current Organism:
Desulfovibrio alkalitolerans
NCBI taxonomy Id: 1121439
Other names: D. alkalitolerans DSM 16529, Desulfovibrio alkalitolerans DSM 16529
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.