STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsat_1937Hypothetical protein. (67 aa)    
Predicted Functional Partners:
dsat_1938
PFAM: protein of unknown function DUF1320; KEGG: pol:Bpro_3744 hypothetical protein.
       0.773
dsat_1939
KEGG: tgr:Tgr7_0391 hypothetical protein.
       0.773
dsat_1940
KEGG: stt:t1364 hypothetical protein.
       0.773
dsat_1941
KEGG: ect:ECIAI39_1961 putative phage tail sheath protein.
       0.773
dsat_1934
PFAM: Mu phage/prophage I family protein; KEGG: mag:amb1766 Mu-like prophage FluMu I protein.
       0.746
dsat_1935
Hypothetical protein.
       0.746
dsat_1936
PFAM: Mu-like major head subunit gpT, prophage protein; KEGG: tgr:Tgr7_1637 hypothetical protein.
       0.746
dsat_1942
KEGG: mca:MCA2918 prophage MuMc02, major tail tube protein; TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein.
       0.746
dsat_1943
PFAM: Mu-like prophage FluMu protein gp41; KEGG: mca:MCA2916 hypothetical protein.
       0.746
dsat_1944
KEGG: gan:UMN179_01630 Phage-related minor tail protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region-containing protein.
       0.463
Your Current Organism:
Desulfovibrio alkalitolerans
NCBI taxonomy Id: 1121439
Other names: D. alkalitolerans DSM 16529, Desulfovibrio alkalitolerans DSM 16529
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.