STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsat_1995PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: dde:Dde_3502 fructose-bisphosphate aldolase. (252 aa)    
Predicted Functional Partners:
dsat_0414
PFAM: 3-dehydroquinate synthase; KEGG: dvm:DvMF_1750 3-dehydroquinate synthase.
 
 
 0.957
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
 
 0.809
dsat_2101
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein, Pyruvate/ketoisovalerate oxidoreductase, Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein, thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: dvl:Dvul_0348 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein.
     
 0.787
dsat_2278
TIGRFAM: transketolase; PFAM: Transketolase central region, Transketolase domain-containing protein; KEGG: dsa:Desal_3668 transketolase; SMART: Transketolase central region; Belongs to the transketolase family.
  
 
 0.728
dsat_0727
TIGRFAM: Uncharacterized protein family UPF0066; PFAM: class II aldolase/adducin family protein, Uncharacterized protein family UPF0066; KEGG: dba:Dbac_2472 class II aldolase/adducin family protein; SMART: class II aldolase/adducin family protein.
    
  0.710
tpiA
Triosephosphate isomerase, bacterial/eukaryotic; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 
 0.702
dsat_2463
KEGG: dvl:Dvul_1089 fructose-1,6-bisphosphate aldolase, class II; TIGRFAM: fructose-1,6-bisphosphate aldolase, class II, ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II.
    
 0.697
dsat_0686
Catalase domain protein; KEGG: dbr:Deba_0799 catalase; PFAM: Catalase domain protein; SMART: Catalase domain protein; Belongs to the catalase family.
   
    0.696
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
  
 
 0.693
fbp
KEGG: dsa:Desal_1815 fructose-1,6-bisphosphatase; HAMAP : Fructose-1,6-bisphosphatase class 1; PFAM: Inositol phosphatase/fructose-16-bisphosphatase; Belongs to the FBPase class 1 family.
    
 0.691
Your Current Organism:
Desulfovibrio alkalitolerans
NCBI taxonomy Id: 1121439
Other names: D. alkalitolerans DSM 16529, Desulfovibrio alkalitolerans DSM 16529
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