STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsat_2049PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dvm:DvMF_1603 monovalent cation/H+ antiporter subunit D. (596 aa)    
Predicted Functional Partners:
dsat_0528
PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: dau:Daud_2162 NADH-ubiquinone oxidoreductase, chain 4L.
 
 0.993
dsat_0534
PFAM: cation antiporter; KEGG: dak:DaAHT2_2517 cation antiporter.
 
 
 0.990
dsat_0533
PFAM: multiple resistance and pH regulation protein F; KEGG: dat:HRM2_35400 MnhF.
 
 
 0.989
dsat_0532
KEGG: dau:Daud_2166 monovalent cation/proton antiporter subunit MnhG/PhaG; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit.
 
 
 0.986
dsat_2051
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dsa:Desal_1497 monovalent cation/H+ antiporter subunit D.
 
0.984
dsat_0529
PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: dat:HRM2_35380 MnhB; overlaps another CDS with the same product name.
 
 
 0.982
dsat_0530
KEGG: dak:DaAHT2_2521 Na+/H+ antiporter MnhB subunit-related protein; overlaps another CDS with the same product name.
 
 
 0.980
dsat_0526
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dau:Daud_2160 NADH dehydrogenase (quinone).
 
0.948
dsat_0920
PFAM: NADH/Ubiquinone/plastoquinone (complex I), NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; KEGG: dsa:Desal_3233 NADH/ubiquinone/plastoquinone (complex I).
 
0.944
nuoD
NAD(P)H-quinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
 
 
  0.939
Your Current Organism:
Desulfovibrio alkalitolerans
NCBI taxonomy Id: 1121439
Other names: D. alkalitolerans DSM 16529, Desulfovibrio alkalitolerans DSM 16529
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