STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsat_2182PFAM: 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein, Nitrate reductase gamma subunit; KEGG: dal:Dalk_5066 4Fe-4S ferredoxin iron-sulfur binding domain protein. (578 aa)    
Predicted Functional Partners:
dsat_1159
PFAM: methyl-viologen-reducing hydrogenase delta subunit, Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; KEGG: dma:DMR_05420 quinone-interacting membrane-bound oxidoreductase complex subunit B.
 
 0.997
dsat_2108
PFAM: Lactate utilization protein B/C, 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein, protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: das:Daes_1075 hypothetical protein; overlaps another CDS with the same product name.
  
 0.997
dsat_2181
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dal:Dalk_5067 CoB--CoM heterodisulfide reductase.
 0.996
dsat_0573
PFAM: methyl-viologen-reducing hydrogenase delta subunit; KEGG: dma:DMR_01930 methyl-viologen-reducing hydrogenase delta subunit family protein.
 
 0.992
dsat_2185
PFAM: methyl-viologen-reducing hydrogenase delta subunit, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; KEGG: dku:Desku_1949 methyl-viologen-reducing hydrogenase subunit delta.
 
 0.989
dsat_2101
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein, Pyruvate/ketoisovalerate oxidoreductase, Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein, thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: dvl:Dvul_0348 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein.
  
 
 0.970
dsat_0571
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dsa:Desal_0601 CoB--CoM heterodisulfide reductase.
 0.965
dsat_1158
KEGG: dma:DMR_05410 quinone-interacting membrane-bound oxidoreductase complex subunit A.
 
 0.915
dsat_0572
PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; KEGG: dvl:Dvul_0828 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
 0.894
dsat_0271
PFAM: Lactate utilization protein B/C; KEGG: sfu:Sfum_0236 hypothetical protein.
  
 0.879
Your Current Organism:
Desulfovibrio alkalitolerans
NCBI taxonomy Id: 1121439
Other names: D. alkalitolerans DSM 16529, Desulfovibrio alkalitolerans DSM 16529
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