STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsat_2222KEGG: dal:Dalk_2428 resolvase; PFAM: Resolvase domain-containing protein; SMART: Resolvase domain-containing protein. (223 aa)    
Predicted Functional Partners:
dsat_1933
KEGG: adn:Alide_0063 phage virion morphogenesis protein; TIGRFAM: phage virion morphogenesis protein; PFAM: virion morphogenesis (tail completion) protein.
   
    0.687
dsat_1751
KEGG: das:Daes_0194 nucleoside recognition domain-containing protein.
   
    0.547
dsat_2223
Hypothetical protein.
       0.472
dsat_1948
Phage baseplate assembly protein V; KEGG: rsc:RCFBP_11734 phage baseplate component; TIGRFAM: phage baseplate assembly protein V; PFAM: baseplate assembly protein V.
   
  
 0.442
dsat_1945
PFAM: P2 GpU family protein; KEGG: bcj:BCAS0512 hypothetical protein.
   
    0.434
dsat_1950
PFAM: Baseplate J family protein; KEGG: pwa:Pecwa_2887 baseplate J family protein.
   
    0.408
Your Current Organism:
Desulfovibrio alkalitolerans
NCBI taxonomy Id: 1121439
Other names: D. alkalitolerans DSM 16529, Desulfovibrio alkalitolerans DSM 16529
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.