STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsat_2264PFAM: aminoglycoside phosphotransferase; KEGG: dsa:Desal_0253 aminoglycoside phosphotransferase. (303 aa)    
Predicted Functional Partners:
dsat_2271
KEGG: das:Daes_3132 homocysteine S-methyltransferase; PFAM: homocysteine S-methyltransferase, dihydropteroate synthase DHPS, cobalamin B12-binding domain protein, Methionine synthase B12-binding module cap domain protein; SMART: Methionine synthase B12-binding module cap domain protein.
    
  0.782
dsat_0332
Rhodanese-like protein; KEGG: dsa:Desal_0374 rhodanese domain protein; PFAM: Rhodanese-like protein; SMART: Rhodanese-like protein.
  
 
  0.754
dsat_1108
PFAM: homoserine dehydrogenase, homoserine dehydrogenase NAD-binding protein, amino acid-binding ACT domain-containing protein; KEGG: dvl:Dvul_2094 homoserine dehydrogenase.
    
 0.713
dsat_1328
KEGG: dde:Dde_0171 L-threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit.
    
 0.703
dsat_1594
KEGG: dma:DMR_17890 aspartate kinase; TIGRFAM: aspartate kinase, monofunctional class, aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase, amino acid-binding ACT domain-containing protein; Belongs to the aspartokinase family.
  
 
 0.679
dsat_0896
TIGRFAM: phosphoserine phosphatase SerB, HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: dma:DMR_33050 phosphoserine phosphatase.
    
 0.674
dsat_0709
O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: dma:DMR_07630 O-acetylhomoserine (thiol)-lyase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein.
    
  0.668
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
    
  0.653
dsat_2228
KEGG: hmo:HM1_2697 threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit.
    
 0.629
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
     
 0.629
Your Current Organism:
Desulfovibrio alkalitolerans
NCBI taxonomy Id: 1121439
Other names: D. alkalitolerans DSM 16529, Desulfovibrio alkalitolerans DSM 16529
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.