STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsat_2265KEGG: das:Daes_0722 hypothetical protein. (119 aa)    
Predicted Functional Partners:
dsat_2267
KEGG: dma:DMR_21170 hypothetical protein; TIGRFAM: MJ0042 family finger-like protein; PFAM: Protein of unknown function DUF3426.
 
     0.790
dsat_1689
KEGG: dvl:Dvul_0115 hypothetical protein.
  
     0.767
dsat_1688
PFAM: protein of unknown function UPF0153; KEGG: das:Daes_2029 hypothetical protein.
  
     0.760
dsat_2629
KEGG: dsa:Desal_1565 hypothetical protein.
  
     0.744
dsat_1098
PFAM: Polysulfide reductase NrfD; KEGG: dsa:Desal_1045 polysulphide reductase NrfD.
  
     0.733
fur-2
PFAM: ferric-uptake regulator; KEGG: dma:DMR_04370 Fur family transcriptional regulator; Belongs to the Fur family.
  
    0.710
dsat_0515
PFAM: Rubrerythrin; KEGG: pca:Pcar_0084 rubrerythrin.
   
    0.704
dsat_0753
SMART: double-stranded RNA-specific adenosine deaminase (DRADA); KEGG: dvl:Dvul_2942 hypothetical protein.
   
    0.704
dsat_0787
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen, Peroxiredoxin; KEGG: dsa:Desal_0033 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
   
    0.704
dsat_2774
KEGG: das:Daes_3340 putative lipoprotein.
  
     0.677
Your Current Organism:
Desulfovibrio alkalitolerans
NCBI taxonomy Id: 1121439
Other names: D. alkalitolerans DSM 16529, Desulfovibrio alkalitolerans DSM 16529
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.