STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsat_2418PFAM: glycosyl transferase family 2, Tetratricopeptide TPR_2 repeat-containing protein; KEGG: dde:Dde_1487 glycosyl transferase, group 2 family protein. (540 aa)    
Predicted Functional Partners:
dsat_2417
PFAM: glycosyl transferase group 1; KEGG: das:Daes_0225 hypothetical protein.
 
    0.875
dsat_2419
KEGG: dvm:DvMF_0452 hypothetical protein.
       0.773
dsat_1621
KEGG: das:Daes_0243 putative MerR family transcriptional regulator.
  
     0.670
dsat_1127
KEGG: das:Daes_2347 phosphoesterase PA-phosphatase-like protein; PFAM: phosphoesterase PA-phosphatase related protein; SMART: phosphoesterase PA-phosphatase related protein.
 
     0.668
dsat_1082
KEGG: dma:DMR_43030 hypothetical protein.
  
     0.662
dsat_2622
KEGG: dde:Dde_2420 dolichyl-phosphate-mannose-protein mannosyltransferase family protein.
 
     0.603
dsat_1094
KEGG: drt:Dret_0269 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II, Nucleotidyl transferase.
  
  
 0.595
dsat_0941
KEGG: dsa:Desal_2729 PBS lyase heat domain protein repeat-containing protein.
  
     0.562
dsat_0377
PFAM: Flagellar hook-length control protein-like protein; KEGG: dsa:Desal_3007 flagellar hook-length control protein.
  
    0.551
dsat_1190
KEGG: dma:DMR_14150 hypothetical protein.
  
     0.537
Your Current Organism:
Desulfovibrio alkalitolerans
NCBI taxonomy Id: 1121439
Other names: D. alkalitolerans DSM 16529, Desulfovibrio alkalitolerans DSM 16529
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.