STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsat_2681KEGG: dsa:Desal_2601 hypothetical protein. (138 aa)    
Predicted Functional Partners:
dsat_2682
KEGG: das:Daes_1359 hypothetical protein.
       0.793
dsat_2683
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
       0.793
dsat_2680
KEGG: dma:DMR_21410 hypothetical protein.
       0.693
dsat_2684
KEGG: dma:DMR_23920 chemotaxis protein CheY; PFAM: response regulator receiver; SMART: response regulator receiver.
       0.658
dsat_2685
RNA polymerase, sigma 28 subunit, FliA/WhiG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
       0.648
dsat_2686
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: dba:Dbac_3469 flagellar synthesis regulator FleN.
       0.648
dsat_2687
KEGG: dvm:DvMF_2013 flagellar biosynthesis protein FlhF; PFAM: GTP-binding signal recognition particle SRP54 G- domain-containing protein; SMART: GTP-binding signal recognition particle SRP54 G- domain-containing protein.
       0.608
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
       0.608
flhB
Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
       0.546
dsat_2690
Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
       0.537
Your Current Organism:
Desulfovibrio alkalitolerans
NCBI taxonomy Id: 1121439
Other names: D. alkalitolerans DSM 16529, Desulfovibrio alkalitolerans DSM 16529
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