STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsat_2724PFAM: NADP-dependent oxidoreductase domain; KEGG: mem:Memar_0534 aldo/keto reductase. (288 aa)    
Predicted Functional Partners:
dsat_2726
KEGG: dbr:Deba_2666 histidine kinase; PFAM: histidine kinase A domain protein, ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein.
 
     0.804
dsat_2725
PFAM: protein of unknown function DUF523, protein of unknown function DUF1722; KEGG: dao:Desac_0400 protein of unknown function DUF523.
       0.757
dsat_1685
Putative transcriptional regulator, Crp/Fnr family; KEGG: dol:Dole_2760 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding protein; SMART: cyclic nucleotide-binding protein.
   
 
 0.755
dsat_0317
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dvm:DvMF_1805 glyoxalase/bleomycin resistance protein/dioxygenase.
  
 
 0.711
dsat_1563
PFAM: inositol monophosphatase; KEGG: dvu:DVU1680 inositol-1-monophosphatase.
   
 
 0.705
dsat_2834
Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.
    
 0.693
dsat_1359
Peptidyl-prolyl cis-trans isomerase cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.688
dsat_1831
Peptidyl-prolyl cis-trans isomerase cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.688
dsat_2298
KEGG: das:Daes_1844 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1, Phosphomethylpyrimidine kinase.
  
 
 0.682
dsat_2401
PFAM: PfkB domain protein; KEGG: dsa:Desal_2501 PfkB domain protein.
    
 0.681
Your Current Organism:
Desulfovibrio alkalitolerans
NCBI taxonomy Id: 1121439
Other names: D. alkalitolerans DSM 16529, Desulfovibrio alkalitolerans DSM 16529
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