STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429985_00300Unannotated protein. (475 aa)    
Predicted Functional Partners:
GCA_000429985_02048
Unannotated protein.
 
 0.995
GCA_000429985_02049
Unannotated protein.
 
  
 0.963
GCA_000429985_02057
Unannotated protein.
    
 0.833
GCA_000429985_00202
Unannotated protein.
    
 0.771
GCA_000429985_00020
Unannotated protein.
    
 0.749
GCA_000429985_00450
Unannotated protein.
    
 0.749
GCA_000429985_02047
Unannotated protein.
  
  
 
0.701
GCA_000429985_02155
Unannotated protein.
    
  0.698
GCA_000429985_02600
Unannotated protein.
    
  0.698
GCA_000429985_00398
Unannotated protein.
    
  0.691
Your Current Organism:
Desulfovibrio bastinii
NCBI taxonomy Id: 1121441
Other names: D. bastinii DSM 16055, Desulfovibrio bastinii DSM 16055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.